Do they all have the same encryption key?
Once you have something that will encrypt passwords, just apply a loop. If I were doing it, I would create an access database for the task, and encrypt them using a module through a query. That would give you a straight list, and you could work from there. There are a few access modules out there for free that do simple encryption. Mind you, this only works if you know what encryption shceme was used in the first place, they all have the same key, or if you know what they encryption key is. You might need a third field of encryption keys if that's the case.